2024 Inchi plasmid

Inchi plasmid

Author: iwob

August undefined, 2024

WebIn addition to whole genome sequencing projects for several pathogens, we sequenced a number of plasmids as separate projects. Burland V, Shao Y, Perna NT, Plunkett G, Sofia HJ, Blattner FR (1998) The complete DNA sequence and analysis of the large virulence plasmid of Escherichia coli O157:H7. Nucleic Acids Res 26 (18):4196-4204 [PubMed ... WebSep 17, 2024 · Plasmids belonging to the incompatibility group (Inc)HI are widespread in Enterobacteriaceae and most of them express multiple antibiotic resistance determinants. They play a relevant role in the recent spread of colistin resistance. We present in this report novel findings regarding IncHI plasmid conjugation.

Sequencing and comparative genomics analysis of the

WebDec 21, 2024 · It encoded 287 predicted proteins ( S1 Fig ). p2189-NDM belonged to the IncHI1 replicon type as it possessed IncHI1A-like and IncHI1B replicons with 99.8% and 100% similarity scores to IncHI1A and IncHI1B replicons of Salmonella Typhi plasmid R27 (accession no. AF250878), respectively. WebMay 10, 2024 · A total of 24 plasmid replicons were detected, with the most prevalent being IncFIB (AP001918)_1, which was present in 30/46 (65.2%) strains. Hierarchical clustering showed aggregation of strains of the same ST. Cefotaxime (CTX) is not shown here since all strains were selected using CTX. AMP; ampicillin. CHL; chloramphenicol. CIP; ciprofloxacin. depression hit me out of nowhere chords

Comparative genomics and phylogeny of sequenced …

WebBackground: A rare member of metallo-β-lactamases genes, bla SIM-1, carried by a 316-kb plasmid designated pSIM-1-BJ01 was isolated from a clinical cephalosporins- and carbapenem-resistant Klebsiella pneumoniae 13624. This is the first sequence report of a transferable bla SIM-1-carrying conjugative plasmid isolated from K. pneumoniae. WebJul 22, 2024 · IncHI 56 plasmids, often >200 kb in size, share a common core of approximately 160 kb. The differences 57 in size are due to the presence of distinct insertion elements, including many AMR determinants 58 [13]. IncHI-encoded AMR can be present in enterobacterial such as Salmonella, Escherichia coli WebOct 8, 2024 · IncA/C plasmids have been isolated in Salmonellathat contain up to 10 AR genes for more than five classes of antibiotics. The most common AR genes carried by IncA/C are strAB (aminoglycosides), sul2 (sulfonamides), tetAR (tetracycline), blaCMY-2(β-lactams), and floR (chloramphenicols). fia online application form

Cellular location and temperature‐dependent assembly of IncHI1 plasmid …

WebThe IncH family plasmids can produce the H-pilus, a long and flexible conjugation pilus similar to the F-pilus. Here, the pSIM-1-BJ01 possess two transfer regions, carrying the H-pilus assembly and transfer related protein genes ( trhL, trhE, traK, traB, dsbC, traV, traC, trhZ, trhO, htdA, htdK, traW, traU, traN, traD, traI, traF, traH and traG ). WebJun 6, 2024 · 2.1. IncHI plasmids 2.2. Comparative sequence analysis 2.3. Molecular clock test 3. Results and Discussion 3.1. IncHI plasmids homology 3.2. IncHI plasmids Backbone 3.2.1. Molecular Clock Test 3.3. IncHI plasmids and MDR 3.3.1. Multidrug resistances mediated by IncHI1 plasmids 3.3.2. Phylogenetical relation among IncHI1 R27-like … fia online apply portalWebMar 30, 2024 · IncHI plasmid is an important vector for the tet(X4) gene, which belongs to the H incompatibility (IncH) group, including IncHI1 to IncHI5 subgroups (Phan and Wain, 2008; Cui et al., 2024). The IncHI1 plasmid is a conjugative plasmid … depression hobbies reddit

"WebOct 10, 2014 · The pKOX_R1 is a chimeric plasmid, containing replication initiation protein genes of at least two replicon types: IncA/C and a novel IncH group. The sequence analyses of the IncH tra genes present in pKOX_R1 indicates that it lacks, in addition to the trhR and trhY coding sequences, other crucial IncHI genes such as trhA , coding for the major ... " - Inchi plasmid

Inchi plasmid

WebOct 1, 2024 · IncHI plasmids are important vectors in the dissemination of heavy metal resistance genes and antimicrobial resistance genes (Cain and Hall, 2012). These plasmids are usually larger than 200 kb and have a … WebMay 3, 2016 · IncHI plasmids account for multiple antimicrobial resistance in Salmonella and other enterobacterial genera. These plasmids are generally very stable in their bacterial hosts. R27 is the...

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WebJun 1, 2024 · IncHI plasmids are typically large, often >200 kb in size. Comparative analysis of some of the IncHI1 plasmids shows that these plasmids are very diverse in terms of genetic structure and have accumulated a number of accessory resistance regions [6], [7].

WebIncHI plasmid conjugation is thermodependent and all transfer‐related genes are encoded in six operons (tra operons). Using R27, the prototype of IncHI1 plasmids, we reported that the plasmid‐encoded factor HtdA represses four of the six tra operons. WebMay 4, 2016 · Plasmids in the HI incompatibility group (IncHI) occur widely in the Enterobacteriaceae. Members of this group can carry a wide variety of resistance genes including those encoding the metallo-β ...

WebMar 1, 2008 · Abstract Conjugative plasmids have evolved entry exclusion mechanisms to inhibit redundant DNA transfer from donor cells into recipients harboring isogenic or closely related plasmids. This exclusion phenomenon has been documented in the incompatibility H group (IncH) plasmid R27. WebGenome Sequence of the E. coli Isolate. The complete genome of the E. coli isolate 201,609 was 5.53Mb which contained a 5.20Mb circular chromosome and three resistance plasmids named pE648CTX-M-65, pE648NDM-5 and pE648MCR-1, respectively. The GC percentage of the genome is 50.2%. The average depth of the chromosome (the raw data/the assembled …

WebJul 7, 2008 · IncHI plasmids are the only known plasmids in human pathogens that are temperature sensitive for transfer. Using R27 sequence data and transposon mutagenesis, the transfer determinants responsible for the spread of H-plasmids were identified ( Rooker et al., 1999; Sherburne et al ., 2000 ).

WebMay 1, 2024 · The I-complex plasmids contain incompatibility groups I, K, B and Z, which share morphological and serological similarities in their pili. 52 IncI, or MOB P according to relaxase typing, is a group of low-copy-number, narrow-host-range, conjugative plasmids, which vary in size from 50 to 250 kb. 19 A typical feature for this plasmid group is the … fia operations americas divisionWebOct 10, 2014 · IncHI plasmid conjugation is thermodependent and all transfer-related genes are encoded in six operons ( tra operons). Using R27, the prototype of IncHI1 plasmids, we reported that the plasmid-encoded factor HtdA represses four of the six tra operons. depression herediteWebThe common regions of the IncHI plasmids contain genes that are essential for plasmid replication, maintenance, and transmission (which might define the general backbone for the group), as well as an extensive series of homologous core genes. Acquired DNA, that is not common among plasmids core, includes class 1 integrons, depression homöopathieWebJun 1, 2024 · Introduction. Plasmids of the H incompatibility (IncH) complex can be divided into two major Inc groups, IncHI and IncHII [1]. Incompatibility interactions between IncHI and IncHII can be explained by a negative control model: the IncHII repressor binds more strongly to the IncHI operator site than the IncHI repressor binds to the IncHII operator; … fia online apply pakistanWebEvidence is provided that IncHI1/pST17 is an important carrier for the tet(X4) spread in Enterobacteriaceae species, and these transmission mechanisms may perform in the environment. The tigecycline resistance gene tet(X4) was widespread in various bacteria. However, limited information about the plasmid harboring the tet(X4) gene spread among … fia online apply jobWebMay 1, 2015 · Introduction. IncL/M is currently one of the six major resistance plasmid families identified in clinically relevant Enterobacteriaceae, together with IncF, IncA/C, IncI, IncHI, and IncN [].IncL/M-type plasmids have been identified in association with antibiotic resistance genes encoding extended-spectrum β-lactamases (ESBL) (bla CTX-M-3, bla … depression hotlines numbers canadaWebJul 7, 2008 · IncHI plasmids are the only known plasmids in human pathogens that are temperature sensitive for transfer. Using R27 sequence data and transposon mutagenesis, the transfer determinants responsible for the spread of H-plasmids were identified ( Rooker et al. , 1999 ; Sherburne et al ., 2000 ). depression hotline numbers